| Package | Description |
|---|---|
| uk.ac.ebi.arrayexpress2.magetab.datamodel.adf.node |
Classes that model the nodes in the ADF graph datastructure, as described by the
MAGE-TAB specification.
|
| uk.ac.ebi.arrayexpress2.magetab.datamodel.graph |
Some high-level graph modelling classes, for representing abstract graphs.
|
| uk.ac.ebi.arrayexpress2.magetab.datamodel.sdrf.node |
Classes that model nodes in the SDRF graph datastructure, as described by the
MAGE-TAB specification.
|
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractADFNode
An abstract top-level implementation of an ADFNode.
|
class |
CompositeElementNode
Models "Composite Element" nodes in the ADF graph, according to the MAGE-TAB specification.
|
class |
FeatureNode
Models "Feature" nodes in the ADF graph, according to the MAGE-TAB specification.
|
class |
ReporterNode
Models "Reporter" nodes in the ADF graph, according to the MAGE-TAB specification.
|
| Modifier and Type | Class and Description |
|---|---|
class |
UnresolvedPlaceholderNode
A dedicated type of graph node that serves as a simple placeholder in lieu of the node being fully parsed.
|
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractSDRFNode
An abstract top-level implementation of an SDRFNode.
|
class |
ArrayDataMatrixNode
An array data matrix node in the graph.
|
class |
ArrayDataNode
An array data node in the graph.
|
class |
ArrayDesignNode
Deprecated.
since version 1.1
|
class |
AssayNode
An Assay Node, in the SDRF graph.
|
class |
DerivedArrayDataMatrixNode
A derived array data matrix node in the graph.
|
class |
DerivedArrayDataNode
A derived array data node in the graph.
|
class |
ExtractNode
An extract node in the graph.
|
class |
HybridizationNode
A hybridization node in the graph.
|
class |
ImageNode
An image node in the graph.
|
class |
LabeledExtractNode
A labeled extract node in the graph.
|
class |
NormalizationNode
A normalization node in the graph.
|
class |
ProtocolApplicationNode
A protocol "node" in the graph.
|
class |
SampleNode
A sample node in the graph.
|
class |
ScanNode
A scan node in the graph.
|
class |
SourceNode
A source node in the graph.
|
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