Project Dependencies

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

GroupId ArtifactId Version Type License
annotare annotare-validator 1.1 jar -
net.sourceforge.fluxion fluxion-spi 1.0-alpha jar GNU Lesser General Public License
org.isatools graph2tab 4.2.2 jar -
org.mged.magetab erroritem 1.0 jar -
org.slf4j jcl-over-slf4j 1.7.7 jar MIT License
org.slf4j slf4j-api 1.7.7 jar MIT License

test

The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:

GroupId ArtifactId Version Type License
junit junit 4.4 jar Common Public License Version 1.0
log4j log4j 1.2.17 jar The Apache Software License, Version 2.0
org.slf4j slf4j-log4j12 1.7.7 jar MIT License

Project Transitive Dependencies

The following is a list of transitive dependencies for this project. Transitive dependencies are the dependencies of the project dependencies.

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

GroupId ArtifactId Version Type License
commons-io commons-io 2.0.1 jar The Apache Software License, Version 2.0
commons-lang commons-lang 2.3 jar /LICENSE.txt
net.sf.opencsv opencsv 2.1 jar Apache 2
uk.ac.ebi jutils 1.4 jar -

Project Dependency Graph

Dependency Tree

  • uk.ac.ebi.arrayexpress2:limpopo:jar:1.1.8 Information
    • org.mged.magetab:erroritem:jar:1.0 (compile) Information
    • net.sourceforge.fluxion:fluxion-spi:jar:1.0-alpha (compile) Information
    • org.isatools:graph2tab:jar:4.2.2 (compile) Information
      • uk.ac.ebi:jutils:jar:1.4 (compile) Information
      • commons-lang:commons-lang:jar:2.3 (compile) Information
      • net.sf.opencsv:opencsv:jar:2.1 (compile) Information
      • commons-io:commons-io:jar:2.0.1 (compile) Information
    • org.slf4j:slf4j-api:jar:1.7.7 (compile) Information
    • org.slf4j:jcl-over-slf4j:jar:1.7.7 (compile) Information
    • junit:junit:jar:4.4 (test) Information
    • org.slf4j:slf4j-log4j12:jar:1.7.7 (test) Information
    • log4j:log4j:jar:1.2.17 (test) Information
    • annotare:annotare-validator:jar:1.1 (compile) Information

Licenses

Apache 2: opencsv

Unknown: JUtils - Miscellanea of Java Utils, annotare-validator, erroritem, graph2tab - The graph-to-spreadsheet conversion algorithm

Common Public License Version 1.0: JUnit

MIT License: JCL 1.1.1 implemented over SLF4J, SLF4J API Module, SLF4J LOG4J-12 Binding

The Apache Software License, Version 2.0: Apache Log4j, Commons IO, Lang

GNU Lesser General Public License: LIMPOPO MAGE-TAB Parser/Validator, fluxion-spi

Dependency File Details

Filename Size Entries Classes Packages JDK Rev Debug
annotare-validator-1.1.jar 40.97 kB 21 7 2 1.5 debug
commons-io-2.0.1.jar 155.77 kB 122 104 6 1.5 debug
commons-lang-2.3.jar 239.53 kB 140 124 9 1.1 debug
junit-4.4.jar 157.69 kB 188 154 20 1.5 debug
log4j-1.2.17.jar 478.40 kB 353 314 21 1.4 debug
opencsv-2.1.jar 16.37 kB 20 8 2 1.5 debug
fluxion-spi-1.0-alpha.jar 7.14 kB 17 4 1 1.6 debug
graph2tab-4.2.2.jar 27.34 kB 25 12 2 1.5 debug
erroritem-1.0.jar 15.78 kB 19 5 1 1.5 debug
jcl-over-slf4j-1.7.7.jar 16.13 kB 23 9 2 1.5 debug
slf4j-api-1.7.7.jar 28.57 kB 35 24 3 1.5 debug
slf4j-log4j12-1.7.7.jar 8.66 kB 16 6 1 1.5 debug
jutils-1.4.jar 23.63 kB 36 16 8 1.5 debug
Total Size Entries Classes Packages JDK Rev Debug
13 1.19 MB 1,015 787 78 1.6 13
compile: 10 compile: 571.24 kB compile: 458 compile: 313 compile: 36 - compile: 10
test: 3 test: 644.76 kB test: 557 test: 474 test: 42 - test: 3

Dependency Repository Locations

Repo ID URL Release Snapshot Blacklisted
fluxion2 http://metagenome.ncl.ac.uk/fluxions/repo2 Yes Yes Yes
central http://repo.maven.apache.org/maven2 Yes - -
ebi-m2-repo http://www.ebi.ac.uk/~maven/m2repo Yes Yes -
erroritem-repo http://erroritem.sourceforge.net/maven/repo Yes Yes -
hasbanana-repo http://www.hasbanana.com/maven/repo Yes Yes -
ebi-repo http://www.ebi.ac.uk/~maven/m2repo Yes Yes -
coconut.ebi.ac.uk-snapshots http://coconut.ebi.ac.uk:8081/artifactory/local-repo/ Yes Yes -
oerc http://frog.oerc.ox.ac.uk:8080/artifactory/repo/ Yes Yes Yes
limpopo-repo http://limpopo.sourceforge.net/maven/repo Yes Yes -
fluxion http://metagenome.ncl.ac.uk/fluxions/repo Yes Yes Yes
maven2-repository.dev.java.net http://download.java.net/maven/2/ Yes Yes -
apache.snapshots http://repository.apache.org/snapshots - Yes -

Repository locations for each of the Dependencies.

Artifact maven repo2 ebi-m2-repo erroritem-repo hasbanana-repo ebi-repo coconut.ebi.ac.uk-snapshots limpopo-repo maven2-repository.dev.java.net people.apache.snapshots
annotare:annotare-validator:jar:1.1 - - - - - - Found at http://limpopo.sourceforge.net/maven/repo - -
commons-io:commons-io:jar:2.0.1 Found at http://repo2.maven.org/maven2 - - - - - - - -
commons-lang:commons-lang:jar:2.3 Found at http://repo2.maven.org/maven2 - - - - - - - -
junit:junit:jar:4.4 Found at http://repo2.maven.org/maven2 - - - - - - - -
log4j:log4j:jar:1.2.17 Found at http://repo2.maven.org/maven2 - - - - - - - -
net.sf.opencsv:opencsv:jar:2.1 Found at http://repo2.maven.org/maven2 - - - - - - - -
net.sourceforge.fluxion:fluxion-spi:jar:1.0-alpha - - - Found at http://www.hasbanana.com/maven/repo - - - - -
org.isatools:graph2tab:jar:4.2.2 - Found at http://www.ebi.ac.uk/~maven/m2repo - - Found at http://www.ebi.ac.uk/~maven/m2repo Found at http://coconut.ebi.ac.uk:8081/artifactory/local-repo/ - - -
org.mged.magetab:erroritem:jar:1.0 - - Found at http://erroritem.sourceforge.net/maven/repo - - Found at http://coconut.ebi.ac.uk:8081/artifactory/local-repo/ - - -
org.slf4j:jcl-over-slf4j:jar:1.7.7 Found at http://repo2.maven.org/maven2 - - - - - - - -
org.slf4j:slf4j-api:jar:1.7.7 Found at http://repo2.maven.org/maven2 - - - - - - - -
org.slf4j:slf4j-log4j12:jar:1.7.7 Found at http://repo2.maven.org/maven2 - - - - - - - -
uk.ac.ebi:jutils:jar:1.4 - Found at http://www.ebi.ac.uk/~maven/m2repo - - Found at http://www.ebi.ac.uk/~maven/m2repo - - - -
Total maven repo2 ebi-m2-repo erroritem-repo hasbanana-repo ebi-repo coconut.ebi.ac.uk-snapshots limpopo-repo maven2-repository.dev.java.net people.apache.snapshots
13 (compile: 10, test: 3) 8 2 1 1 2 2 1 0 0