Package uk.ac.ebi.arrayexpress2.magetab.handler.adf.impl

Specific, concrete ADF header handler implementations.

See: Description

Class Summary

Class	Description
AccessionHandler	A handler that handles rows in the ADF that describe the arrayaexpress accession number in a comment field.
ArrayDesignNameHandler	A handler that handlers ADF rows describing the array design name.
CommentHandler	A handler that handles ADF rows describing comments Tag: Comment[]
PrintingProtocolHandler	A handler that handlers ADF rows describing the printing protocol Tag: Printing Protocol
ProviderHandler	A handler that handles ADF rows describing the provider Tag: Provider
SequencePolymerTypeHandler	A handler that handles ADF rows describing the sequence polymer type Tag: Sequence Polymer Type
SequencePolymerTypeTermAccessionHandler	A handler that handles ADF rows describing the sequence polymer type term accession Tag: Sequence Polymer Type Term Accession Number
SequencePolymerTypeTermSourceRefHandler	A handler that handles ADF rows describing the sequence polymer type term source reference Tag: Sequence Polymer Type Term Source REF
SubstrateTypeHandler	A handler that handles ADF rows describing the substrate type Tag: Substrate Type
SubstrateTypeTermAccessionHandler	A handler that handles ADF rows describing the substrate type term accession Tag: Substrate Type Term Accession Number
SubstrateTypeTermSourceRefHandler	A handler that handles ADF rows describing the substrate type term source reference Tag: Substrate Type Term Source REF
SurfaceTypeHandler	A handler that handles ADF rows describing the surface type Tag: Surface Type
SurfaceTypeTermAccessionHandler	A handler that handles ADF rows describing the surface type term accession Tag: Surface Type Term Accession Number
SurfaceTypeTermSourceRefHandler	A handler that handles ADF rows describing the surface type term source reference Tag: Surface Type Term Source REF
TechnologyTypeHandler	A handler that handles ADF rows describing the technology type Tag: Technology Type
TechnologyTypeTermAccessionHandler	A handler that handles ADF rows describing the technology type term accession Tag: Technology Type Term Accession Number
TechnologyTypeTermSourceRefHandler	A handler that handles ADF rows describing the technology type term source reference Tag: Technology Type Term Source REF
TermSourceFileHandler	A Handler that handles the ADF rows that point to the file from which term source references are taken from.
TermSourceNameHandler	A handler that handles the term source name declaration rows in ADF.
TermSourceVersionHandler	A handler that handles the term source version declaration rows in ADF.
VersionHandler	A handler that handles the version rows of this ADF.

Package uk.ac.ebi.arrayexpress2.magetab.handler.adf.impl Description

Specific, concrete ADF header handler implementations. This package should contain a comprehensive set of handlers for handling any data found in an ADF header specified by the MAGE-TAB specification.